Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015921584.1_cds_XP_016470493.1_62935
CDS Infomation

[gene=LOC107792773] [db_xref=GeneID:107792773] [protein=probable methyltransferase PMT9 isoform X3] [protein_id=XP_016470493.1] [location=complement(join(6234..6546,7974..8194,8309..8421,8695..9289,9379..9561,9743..9907,10033..10038))] [gbkey=CDS]
Sequence

ATGCATGTTTGTGATACAAGGTATTCCGAGTTGATACCCTGTCTTGACAGAAATTTGATA
TATCAATTGAGATTGAGGCTCAATTTGACTGTTATGGAGCATTATGAGAGGCATTGCCCC
CCTCCTCAACGTCGTTACAACTGTCTTATCCCTCCTCCAGTTGGTTACAAGATCCCAATT
AGATGGCCAGCTAGTAGAGACCAAGTGTGGAAAGCAAACATACCCCATACACATCTTGCA
CAGGAAAAGTCGGACCAAAATTGGATGGTTGTCGATGGAGACAAAATAAAATTCCCTGGT
GGAGGAACACATTTCCATTATGGAGCGGACAAATACATTGCAGCAATTGCAGGGATGCTC
AAATTTCCTGGTGAAAAACTTAGCAATGGTGGAAACATAAGAAATGTTCTTGACGTTGGC
TGTGGTGTTGCGAGCTTTGGAGCATATCTTCTTTCCCATGATATTATAGCTATGTCGCTT
GCTCCTAATGATGTGCACGAGAATCAAATACAGTTTGCATTAGAAAGGGGAATCCCATCT
GCACTAGGAGTCTTGGGCACCAAAAGACTACCTTATCCAAGCAGATCATTTGAGTTGGCA
CATTGTTCCCGTTGTAGAATCGATTGGCTCCAAAGAGACGGCATTCTTCTGTTGGAACTT
GACAGATTGCTCAGACCGGGTGGTTACTTTGTGTACTCTTCACCTGAAGCTTATGCGCAT
GATGCTGAGAATCGAAGAATTTGGAATGCTATGTATGATCTACTTAGAAGAATGTGTTGG
AGAGTTGTTTCAAGGAGAGACCAAACTGTGATATGGGCTAAACCTCTGAGTAACAGCTGT
TATATGAAGAGAACTCCGGGGACCCAACCTCCCCTGTGCGTGTCTGGTGATGAACCCGAT
GAAGCTTGGAACGTACCGATGAAGGCTTGCATCACTCCTTACTCACCAAAGGTGCATAAG
GAAAAAGGGACTGGACTATTACCTTGGCCAAAGAGGCTTACGGCTCCGCCACCTCGCTTG
GAGGAAATTGGTGTCACTTTGGAGGAATTCCATAAAGACACTAGCGTATGGCATGACAGA
GTGATTGACTATTGGAAGCAGATGAAGTCTGTTAGCCAAAAGAACTCATTTAGGAATGTC
ATGGACATGAACTCAAACCTCGGTGGGTTTGCAGCTGCACTAAAGGATAAGGACATTTGG
GTGATGAACGTTGCTCCTGTTAACATGTCATCAAGAATGAAAACAATATATGATCGAGGC
TTGATTGGAACAGTTCATGACTGGTGTGAGTCATTTTCAACGTACCCACGTACGTATGAC
CTACTTCATGCCTGGATGATCCTCTCGGAGACAGAAGATCGAGGCTGCAGCATTGAGGAT
CTGCTTATTGAGATGGACCGCATGCTACGGCCAGAAGGAGTCGTCATTATAAGGGACAAG
CCTCATATAATAAACTCTGTAAGAAAATTCTTGACTGCACTAAAATGGGATGGATGGTCA
TCAGAGGTAGAACCGCGGACCGATGCTCTCTCCTTGAACGAAGAAAAAGTTTTAATCACA
AGAAAGAAACTTTGGAAGGAGAAATTTACAATTTAA

Peptide Sequence

PEP ID

XP_016470493.1
PEP Infomation

PREDICTED: probable methyltransferase PMT9 isoform X3 [Nicotiana tabacum]
Sequence

MHVCDTRYSELIPCLDRNLIYQLRLRLNLTVMEHYERHCPPPQRRYNCLIPPPVGYKIPI
RWPASRDQVWKANIPHTHLAQEKSDQNWMVVDGDKIKFPGGGTHFHYGADKYIAAIAGML
KFPGEKLSNGGNIRNVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQIQFALERGIPS
ALGVLGTKRLPYPSRSFELAHCSRCRIDWLQRDGILLLELDRLLRPGGYFVYSSPEAYAH
DAENRRIWNAMYDLLRRMCWRVVSRRDQTVIWAKPLSNSCYMKRTPGTQPPLCVSGDEPD
EAWNVPMKACITPYSPKVHKEKGTGLLPWPKRLTAPPPRLEEIGVTLEEFHKDTSVWHDR
VIDYWKQMKSVSQKNSFRNVMDMNSNLGGFAAALKDKDIWVMNVAPVNMSSRMKTIYDRG
LIGTVHDWCESFSTYPRTYDLLHAWMILSETEDRGCSIEDLLIEMDRMLRPEGVVIIRDK
PHIINSVRKFLTALKWDGWSSEVEPRTDALSLNEEKVLITRKKLWKEKFTI

Transcript Sequence

Gene sequence data has not been registered.